ehrapy.plot.qc_metrics#
- ehrapy.plot.qc_metrics(adata, extra_columns=None)[source]#
Plots the calculated quality control metrics for var of adata.
Per default this will display the following features:
missing_values_abs
,missing_values_pct
,mean
,median
,standard_deviation
,max
,min
.- Parameters:
- Return type:
Examples
>>> import ehrapy as ep >>> adata = ep.dt.mimic_2(encoded=True) >>> ep.pp.qc_metrics(adata) >>> ep.pl.qc_metrics(adata)